Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein recruiting.small GTPase (Sar1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_368 1 CH_aag_99 2 2 0.0000802568
Eragrostis curvula 4 1 CH_ecu_600 3 17 0.000128613
Phyllostachys edulis hic_scaffold_12 1 CH_ped_173 3 4 0.000000836668
Populus trichocarpa Chr13 1 CH_ptr_539 2 2 0.000867002
Populus trichocarpa Chr05 1 CH_ptr_540 2 2 0.000867002
Anthoceros agrestis Sc2ySwM_368 2 CH_aag_99 2 2 0.0000802568
Eragrostis curvula 4 2 CH_ecu_600 3 17 0.000128613
Phyllostachys edulis hic_scaffold_12 2 CH_ped_173 3 4 0.000000836668
Populus trichocarpa Chr13 2 CH_ptr_539 2 2 0.000867002
Populus trichocarpa Chr05 2 CH_ptr_540 2 2 0.000867002

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001