Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.cutin and suberin.cuticular lipid formation.alkane-forming pathway.CER1-CER3 alkane-forming complex.aldehyde decarbonylase component CER1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr7_1 1 CH_asa_154 4 21 0.0000000156628
Arabidopsis thaliana Chr1 1 CH_ath_266 2 2 0.0000859476
Calamus simplicifolius scaffold418 1 CH_calsi_58 3 4 0.000000108159
Elaeis guineensis EG5.1_Chr4 1 CH_egu_262 2 2 0.000568397
Glycine max Gm03 1 CH_gma_134 3 3 0.0000000216099
Populus trichocarpa Chr14 1 CH_ptr_197 3 6 0.000000400853
Secale cereale GWHASIY00000002 1 CH_sce_251 3 3 0.000000261191
Sequoiadendron giganteum chr8 1 CH_sgi_470 4 16 0.0000000220726
Vanilla planifolia CM028161.1 1 CH_vpl_256 2 2 0.000221664
Allium sativum chr7_1 2 CH_asa_154 4 21 0.0000000156628
Arabidopsis thaliana Chr1 2 CH_ath_266 2 2 0.0000859476
Calamus simplicifolius scaffold418 2 CH_calsi_58 3 4 0.000000108159
Elaeis guineensis EG5.1_Chr4 2 CH_egu_262 2 2 0.000568397
Glycine max Gm03 2 CH_gma_134 3 3 0.0000000216099
Populus trichocarpa Chr14 2 CH_ptr_197 3 6 0.000000400853
Secale cereale GWHASIY00000002 2 CH_sce_251 3 3 0.000000261191
Sequoiadendron giganteum chr8 2 CH_sgi_470 4 16 0.0000000220726
Vanilla planifolia CM028161.1 2 CH_vpl_256 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001