Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.cutin and suberin.cuticular lipid formation.acyl-reduction pathway.wax ester synthase and diacylglycerol acyltransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr3 1 CH_ath_139 3 3 0.000000147742
Hordeum vulgare chr5H 1 CH_hvu_82 5 14 0.000000000472585
Musa acuminata chr04 1 CH_mac_196 2 2 0.000568182
Oryza sativa ssp. indica Chr1 1 CH_osaindica_323 2 3 0.000309965
Oryza sativa Kitaake Chr1 1 CH_osak_405 2 2 0.000337714
Oryza sativa ssp. japonica chr01 1 CH_osa_310 2 2 0.000316874
Oropetium thomaeum Chromosome_3 1 CH_oth_262 2 2 0.000711845
Populus trichocarpa Chr19 1 CH_ptr_372 2 2 0.0001734
Secale cereale GWHASIY00000005 1 CH_sce_258 4 8 0.000000295815
Secale cereale GWHASIY00000007 1 CH_sce_275 5 35 0.000000679627
Sequoiadendron giganteum chr3 1 CH_sgi_595 3 4 0.00000119594
Triticum aestivum Chr5B 1 CH_tae_461 4 6 0.0000000194459
Triticum aestivum Chr5D 1 CH_tae_892 3 4 0.0000163102
Triticum turgidum chr5A 1 CH_ttu_328 3 3 0.00000225639
Triticum turgidum chr5B 1 CH_ttu_439 3 5 0.0000225531
Arabidopsis thaliana Chr3 2 CH_ath_139 3 3 0.000000147742
Hordeum vulgare chr5H 2 CH_hvu_82 5 14 0.000000000472585
Musa acuminata chr04 2 CH_mac_196 2 2 0.000568182
Oryza sativa ssp. indica Chr1 2 CH_osaindica_323 2 3 0.000309965
Oryza sativa Kitaake Chr1 2 CH_osak_405 2 2 0.000337714
Oryza sativa ssp. japonica chr01 2 CH_osa_310 2 2 0.000316874
Oropetium thomaeum Chromosome_3 2 CH_oth_262 2 2 0.000711845
Populus trichocarpa Chr19 2 CH_ptr_372 2 2 0.0001734
Secale cereale GWHASIY00000005 2 CH_sce_258 4 8 0.000000295815
Secale cereale GWHASIY00000007 2 CH_sce_275 5 35 0.000000679627
Sequoiadendron giganteum chr3 2 CH_sgi_595 3 4 0.00000119594
Triticum aestivum Chr5B 2 CH_tae_461 4 6 0.0000000194459
Triticum aestivum Chr5D 2 CH_tae_892 3 4 0.0000163102
Triticum turgidum chr5A 2 CH_ttu_328 3 3 0.00000225639
Triticum turgidum chr5B 2 CH_ttu_439 3 5 0.0000225531

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001