Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.lignin.monolignol biosynthesis.ferulate 5-hydroxylase (F5H)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG08 1 CH_aco_77 2 2 0.0000829463
Phyllostachys edulis hic_scaffold_5 1 CH_ped_179 3 5 0.000000871485
Secale cereale GWHASIY00000003 1 CH_sce_347 3 4 0.00000355648
Secale cereale GWHASIY00000001 1 CH_sce_381 3 5 0.00000888948
Saccharum spontaneum Chr5D 1 CH_ssp_1195 2 2 0.00066805
Ananas comosus LG08 2 CH_aco_77 2 2 0.0000829463
Phyllostachys edulis hic_scaffold_5 2 CH_ped_179 3 5 0.000000871485
Secale cereale GWHASIY00000003 2 CH_sce_347 3 4 0.00000355648
Secale cereale GWHASIY00000001 2 CH_sce_381 3 5 0.00000888948
Saccharum spontaneum Chr5D 2 CH_ssp_1195 2 2 0.00066805

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001