Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.cell wall proteins.expansin activities.alpha-like-class expansin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr2 1 CH_asa_13 7 11 3.16941e-21
Arabidopsis thaliana Chr3 1 CH_ath_331 2 3 0.000257837
Brachypodium distachyon Bd1 1 CH_bdi_289 2 2 0.000370005
Hordeum vulgare chr4H 1 CH_hvu_203 3 13 0.00000282535
Lolium perenne Lp_chr4_0 1 CH_lpe_401 2 3 0.000578543
Secale cereale GWHASIY00000005 1 CH_sce_191 4 19 0.0000000383676
Sequoiadendron giganteum chr11 1 CH_sgi_66 8 12 4.56962e-24
Triticum aestivum Chr5A 1 CH_tae_286 4 5 0.000000000098285
Triticum aestivum Chr4D 1 CH_tae_287 4 5 0.000000000098285
Triticum aestivum Chr4B 1 CH_tae_656 3 4 0.000000764205
Triticum dicoccoides 5A 1 CH_tdi_558 2 3 0.000534312
Vanilla planifolia CM028156.1 1 CH_vpl_359 2 5 0.000738798
Allium sativum chr2 2 CH_asa_13 7 11 3.16941e-21
Arabidopsis thaliana Chr3 2 CH_ath_331 2 3 0.000257837
Brachypodium distachyon Bd1 2 CH_bdi_289 2 2 0.000370005
Hordeum vulgare chr4H 2 CH_hvu_203 3 13 0.00000282535
Lolium perenne Lp_chr4_0 2 CH_lpe_401 2 3 0.000578543
Secale cereale GWHASIY00000005 2 CH_sce_191 4 19 0.0000000383676
Sequoiadendron giganteum chr11 2 CH_sgi_66 8 12 4.56962e-24
Triticum aestivum Chr5A 2 CH_tae_286 4 5 0.000000000098285
Triticum aestivum Chr4D 2 CH_tae_287 4 5 0.000000000098285
Triticum aestivum Chr4B 2 CH_tae_656 3 4 0.000000764205
Triticum dicoccoides 5A 2 CH_tdi_558 2 3 0.000534312
Vanilla planifolia CM028156.1 2 CH_vpl_359 2 5 0.000738798

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001