Functional clusters
Information
- Type MapMan
- Description Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.arabinogalactan-protein activities.classical arabinogalactan protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr7_1 | 1 | CH_asa_9 | 8 | 11 | 3.37794e-24 |
| Secale cereale | GWHASIY00000007 | 1 | CH_sce_225 | 3 | 5 | 0.000000124367 |
| Allium sativum | chr7_1 | 2 | CH_asa_9 | 8 | 11 | 3.37794e-24 |
| Secale cereale | GWHASIY00000007 | 2 | CH_sce_225 | 3 | 5 | 0.000000124367 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |