Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.rhamnogalacturonan-I galactose oxidase (RUBY)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG15 1 CH_aco_24 3 6 0.000000825464
Glycine max Gm06 1 CH_gma_558 2 2 0.000569336
Populus trichocarpa Chr05 1 CH_ptr_371 2 2 0.0001734
Solanum lycopersicum SL4.0ch04 1 CH_sly_67 4 4 0.00000000000303328
Ananas comosus LG15 2 CH_aco_24 3 6 0.000000825464
Glycine max Gm06 2 CH_gma_558 2 2 0.000569336
Populus trichocarpa Chr05 2 CH_ptr_371 2 2 0.0001734
Solanum lycopersicum SL4.0ch04 2 CH_sly_67 4 4 0.00000000000303328

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001