Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.hemicellulose.xyloglucan.modification and degradation.alpha-L-fucosidase (FXG)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr8 1 CH_asa_512 2 2 0.000116261
Magnolia biondii Chr14 1 CH_mbi_147 3 5 0.0000000566069
Oryza alta GWHAZTO00000007 1 CH_oal_496 2 2 0.000120908
Oryza alta GWHAZTO00000019 1 CH_oal_497 2 2 0.000120908
Oryza sativa Kitaake Chr7 1 CH_osak_301 2 2 0.0000562857
Oryza sativa ssp. japonica chr07 1 CH_osa_209 2 2 0.0000528123
Phyllostachys edulis hic_scaffold_10 1 CH_ped_134 3 5 0.0000000996074
Populus trichocarpa Chr02 1 CH_ptr_538 2 2 0.000867002
Solanum lycopersicum SL4.0ch05 1 CH_sly_327 2 2 0.0000586941
Allium sativum chr8 2 CH_asa_512 2 2 0.000116261
Magnolia biondii Chr14 2 CH_mbi_147 3 5 0.0000000566069
Oryza alta GWHAZTO00000007 2 CH_oal_496 2 2 0.000120908
Oryza alta GWHAZTO00000019 2 CH_oal_497 2 2 0.000120908
Oryza sativa Kitaake Chr7 2 CH_osak_301 2 2 0.0000562857
Oryza sativa ssp. japonica chr07 2 CH_osa_209 2 2 0.0000528123
Phyllostachys edulis hic_scaffold_10 2 CH_ped_134 3 5 0.0000000996074
Populus trichocarpa Chr02 2 CH_ptr_538 2 2 0.000867002
Solanum lycopersicum SL4.0ch05 2 CH_sly_327 2 2 0.0000586941

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001