Functional clusters

Information

  • Type MapMan
  • Description Cytoskeleton organisation.cytoskeleton-plasma membrane-cell wall interface.integrin-like protein (AT14a)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 1 CH_aag_144 2 2 0.00024077
Asparagus officinalis AsparagusV1_08 1 CH_aof_18 3 4 0.000000137134
Allium sativum chr5 1 CH_asa_811 2 2 0.000581305
Allium sativum chr1 1 CH_asa_812 2 2 0.000581305
Arabidopsis thaliana Chr5 1 CH_ath_175 3 5 0.00000203104
Arabidopsis thaliana Chr3 1 CH_ath_88 5 52 0.00000000604276
Magnolia biondii Chr16 1 CH_mbi_168 3 4 0.000000141515
Populus trichocarpa Chr05 1 CH_ptr_179 3 3 0.000000100229
Secale cereale GWHASIY00000007 1 CH_sce_643 2 2 0.000136587
Zea mays B73 9 1 CH_zma_244 2 3 0.000460162
Anthoceros agrestis Sc2ySwM_344 2 CH_aag_144 2 2 0.00024077
Asparagus officinalis AsparagusV1_08 2 CH_aof_18 3 4 0.000000137134
Allium sativum chr5 2 CH_asa_811 2 2 0.000581305
Allium sativum chr1 2 CH_asa_812 2 2 0.000581305
Arabidopsis thaliana Chr5 2 CH_ath_175 3 5 0.00000203104
Arabidopsis thaliana Chr3 2 CH_ath_88 5 52 0.00000000604276
Magnolia biondii Chr16 2 CH_mbi_168 3 4 0.000000141515
Populus trichocarpa Chr05 2 CH_ptr_179 3 3 0.000000100229
Secale cereale GWHASIY00000007 2 CH_sce_643 2 2 0.000136587
Zea mays B73 9 2 CH_zma_244 2 3 0.000460162

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001