Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.oxidative phosphorylation.alternative NAD(P)H dehydrogenase activities.type-II NAD(P)H dehydrogenase activities.NAD(P)H dehydrogenase (NDB)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00003 1 CH_atr_237 2 3 0.000238313
Dioscorea dumetorum contig678 1 CH_ddu_291 2 2 0.000690894
Glycine max Gm12 1 CH_gma_597 2 2 0.00079707
Magnolia biondii Chr02 1 CH_mbi_76 4 6 0.0000000000257736
Populus trichocarpa Chr13 1 CH_ptr_165 3 3 0.0000000501143
Amborella trichopoda AmTr_v1.0_scaffold00003 2 CH_atr_237 2 3 0.000238313
Dioscorea dumetorum contig678 2 CH_ddu_291 2 2 0.000690894
Glycine max Gm12 2 CH_gma_597 2 2 0.00079707
Magnolia biondii Chr02 2 CH_mbi_76 4 6 0.0000000000257736
Populus trichocarpa Chr13 2 CH_ptr_165 3 3 0.0000000501143

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001