Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.proteolysis.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.component FtsH4/11

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 5D 1 CH_ata_61 4 9 0.0000000015791
Glycine max Gm14 1 CH_gma_547 2 2 0.000569336
Hordeum vulgare chr5H 1 CH_hvu_40 5 8 0.0000000000000637969
Lolium perenne Lp_chr4_0 1 CH_lpe_14 6 10 3.40379e-17
Oryza alta GWHAZTO00000013 1 CH_oal_562 2 2 0.000201513
Oryza brachyantha 1 1 CH_obr_227 2 2 0.000179201
Oryza sativa ssp. indica Chr1 1 CH_osaindica_274 2 2 0.000154983
Oryza sativa Kitaake Chr1 1 CH_osak_432 2 3 0.000506548
Oryza sativa ssp. japonica chr01 1 CH_osa_251 2 4 0.000158433
Secale cereale GWHASIY00000007 1 CH_sce_8 10 22 3.55297e-25
Triticum aestivum Chr4A 1 CH_tae_106 6 7 4.85163e-16
Triticum aestivum Chr5D 1 CH_tae_23 9 10 1.11496e-26
Triticum aestivum Chr5B 1 CH_tae_73 8 18 2.00201e-19
Triticum turgidum chr4A 1 CH_ttu_123 5 23 0.000000000309247
Triticum turgidum chr5B 1 CH_ttu_358 3 5 0.00000418932
Aegilops tauschii 5D 2 CH_ata_61 4 9 0.0000000015791
Glycine max Gm14 2 CH_gma_547 2 2 0.000569336
Hordeum vulgare chr5H 2 CH_hvu_40 5 8 0.0000000000000637969
Lolium perenne Lp_chr4_0 2 CH_lpe_14 6 10 3.40379e-17
Oryza alta GWHAZTO00000013 2 CH_oal_562 2 2 0.000201513
Oryza brachyantha 1 2 CH_obr_227 2 2 0.000179201
Oryza sativa ssp. indica Chr1 2 CH_osaindica_274 2 2 0.000154983
Oryza sativa Kitaake Chr1 2 CH_osak_432 2 3 0.000506548
Oryza sativa ssp. japonica chr01 2 CH_osa_251 2 4 0.000158433
Secale cereale GWHASIY00000007 2 CH_sce_8 10 22 3.55297e-25
Triticum aestivum Chr4A 2 CH_tae_106 6 7 4.85163e-16
Triticum aestivum Chr5D 2 CH_tae_23 9 10 1.11496e-26
Triticum aestivum Chr5B 2 CH_tae_73 8 18 2.00201e-19
Triticum turgidum chr4A 2 CH_ttu_123 5 23 0.000000000309247
Triticum turgidum chr5B 2 CH_ttu_358 3 5 0.00000418932

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001