Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.proteolysis.metallopeptidase activities.M48 families.zinc metalloprotease (OMA1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 6D 1 CH_ata_58 4 4 0.00000000138847
Brachypodium distachyon Bd3 1 CH_bdi_32 4 4 0.0000000000105541
Eragrostis curvula 1 1 CH_ecu_13 9 16 8.28539e-29
Lolium perenne Lp_chr6_0 1 CH_lpe_106 4 20 0.0000000337522
Oryza alta GWHAZTO00000002 1 CH_oal_492 2 2 0.000120908
Oryza alta GWHAZTO00000014 1 CH_oal_493 2 2 0.000120908
Oryza sativa ssp. indica Chr2 1 CH_osaindica_214 2 3 0.0000516609
Oryza sativa Kitaake Chr2 1 CH_osak_300 2 2 0.0000562857
Panicum hallii Chr01 1 CH_pha_302 2 2 0.000174332
Spirodela polyrhiza pseudo1 1 CH_spo_204 2 4 0.000611465
Saccharum spontaneum Chr4A 1 CH_ssp_1078 2 3 0.000429449
Triticum aestivum Chr5A 1 CH_tae_745 3 3 0.00000314107
Triticum aestivum Chr6B 1 CH_tae_746 3 3 0.00000314107
Triticum aestivum Chr4A 1 CH_tae_747 3 3 0.00000314107
Aegilops tauschii 6D 2 CH_ata_58 4 4 0.00000000138847
Brachypodium distachyon Bd3 2 CH_bdi_32 4 4 0.0000000000105541
Eragrostis curvula 1 2 CH_ecu_13 9 16 8.28539e-29
Lolium perenne Lp_chr6_0 2 CH_lpe_106 4 20 0.0000000337522
Oryza alta GWHAZTO00000002 2 CH_oal_492 2 2 0.000120908
Oryza alta GWHAZTO00000014 2 CH_oal_493 2 2 0.000120908
Oryza sativa ssp. indica Chr2 2 CH_osaindica_214 2 3 0.0000516609
Oryza sativa Kitaake Chr2 2 CH_osak_300 2 2 0.0000562857
Panicum hallii Chr01 2 CH_pha_302 2 2 0.000174332
Spirodela polyrhiza pseudo1 2 CH_spo_204 2 4 0.000611465
Saccharum spontaneum Chr4A 2 CH_ssp_1078 2 3 0.000429449
Triticum aestivum Chr5A 2 CH_tae_745 3 3 0.00000314107
Triticum aestivum Chr6B 2 CH_tae_746 3 3 0.00000314107
Triticum aestivum Chr4A 2 CH_tae_747 3 3 0.00000314107

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001