Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.proteolysis.metallopeptidase activities.M16 families.peptidase (Nardilysin-like)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00103 1 CH_atr_78 3 3 0.0000000378665
Brachypodium distachyon Bd2 1 CH_bdi_282 2 2 0.000370005
Calamus simplicifolius scaffold359 1 CH_calsi_235 2 2 0.000201396
Dioscorea dumetorum contig89 1 CH_ddu_215 2 2 0.000207268
Oryza alta GWHAZTO00000019 1 CH_oal_225 3 5 0.00000100491
Oryza alta GWHAZTO00000007 1 CH_oal_48 4 4 0.0000000000081014
Oryza brachyantha 7 1 CH_obr_254 2 2 0.000358402
Oryza sativa ssp. indica Chr7 1 CH_osaindica_98 3 3 0.0000000800675
Oryza sativa Kitaake Chr7 1 CH_osak_173 3 3 0.000000166329
Oryza sativa Kitaake Chr1 1 CH_osak_207 3 4 0.000000665241
Oryza sativa ssp. japonica chr07 1 CH_osa_101 3 3 0.0000000836762
Sequoiadendron giganteum chr6 1 CH_sgi_301 4 5 0.0000000000606942
Solanum lycopersicum SL4.0ch04 1 CH_sly_409 2 2 0.000176082
Amborella trichopoda AmTr_v1.0_scaffold00103 2 CH_atr_78 3 3 0.0000000378665
Brachypodium distachyon Bd2 2 CH_bdi_282 2 2 0.000370005
Calamus simplicifolius scaffold359 2 CH_calsi_235 2 2 0.000201396
Dioscorea dumetorum contig89 2 CH_ddu_215 2 2 0.000207268
Oryza alta GWHAZTO00000019 2 CH_oal_225 3 5 0.00000100491
Oryza alta GWHAZTO00000007 2 CH_oal_48 4 4 0.0000000000081014
Oryza brachyantha 7 2 CH_obr_254 2 2 0.000358402
Oryza sativa ssp. indica Chr7 2 CH_osaindica_98 3 3 0.0000000800675
Oryza sativa Kitaake Chr7 2 CH_osak_173 3 3 0.000000166329
Oryza sativa Kitaake Chr1 2 CH_osak_207 3 4 0.000000665241
Oryza sativa ssp. japonica chr07 2 CH_osa_101 3 3 0.0000000836762
Sequoiadendron giganteum chr6 2 CH_sgi_301 4 5 0.0000000000606942
Solanum lycopersicum SL4.0ch04 2 CH_sly_409 2 2 0.000176082

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001