Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.proteolysis.metallopeptidase activities.M10-class metalloprotease (Matrixin)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr6 1 CH_asa_180 3 3 0.0000000450563
Ceratophyllum demersum 3 1 CH_cde_20 4 6 0.0000000302416
Eragrostis curvula 7 1 CH_ecu_671 2 3 0.000348941
Glycine max Gm19 1 CH_gma_111 4 4 0.00000000335893
Glycine max Gm01 1 CH_gma_112 4 4 0.00000000335893
Glycine max Gm02 1 CH_gma_7 12 16 3.04961e-33
Oryza alta GWHAZTO00000022 1 CH_oal_247 3 7 0.00000179042
Oryza brachyantha 10 1 CH_obr_259 2 2 0.000358402
Oryza sativa ssp. indica Chr10 1 CH_osaindica_409 2 3 0.00092984
Oryza sativa Kitaake Chr10 1 CH_osak_414 2 2 0.000337714
Oryza sativa ssp. japonica chr10 1 CH_osa_91 3 3 0.0000000418381
Populus trichocarpa Chr19 1 CH_ptr_236 3 3 0.0000022802
Populus trichocarpa Chr08 1 CH_ptr_74 5 6 0.00000000000150814
Sequoiadendron giganteum chr8 1 CH_sgi_577 3 5 0.000000711854
Solanum lycopersicum SL4.0ch04 1 CH_sly_559 2 2 0.000880411
Solanum lycopersicum SL4.0ch10 1 CH_sly_560 2 2 0.000880411
Saccharum spontaneum Chr4C 1 CH_ssp_1131 2 2 0.000501038
Allium sativum chr6 2 CH_asa_180 3 3 0.0000000450563
Ceratophyllum demersum 3 2 CH_cde_20 4 6 0.0000000302416
Eragrostis curvula 7 2 CH_ecu_671 2 3 0.000348941
Glycine max Gm19 2 CH_gma_111 4 4 0.00000000335893
Glycine max Gm01 2 CH_gma_112 4 4 0.00000000335893
Glycine max Gm02 2 CH_gma_7 12 16 3.04961e-33
Oryza alta GWHAZTO00000022 2 CH_oal_247 3 7 0.00000179042
Oryza brachyantha 10 2 CH_obr_259 2 2 0.000358402
Oryza sativa ssp. indica Chr10 2 CH_osaindica_409 2 3 0.00092984
Oryza sativa Kitaake Chr10 2 CH_osak_414 2 2 0.000337714
Oryza sativa ssp. japonica chr10 2 CH_osa_91 3 3 0.0000000418381
Populus trichocarpa Chr19 2 CH_ptr_236 3 3 0.0000022802
Populus trichocarpa Chr08 2 CH_ptr_74 5 6 0.00000000000150814
Sequoiadendron giganteum chr8 2 CH_sgi_577 3 5 0.000000711854
Solanum lycopersicum SL4.0ch04 2 CH_sly_559 2 2 0.000880411
Solanum lycopersicum SL4.0ch10 2 CH_sly_560 2 2 0.000880411
Saccharum spontaneum Chr4C 2 CH_ssp_1131 2 2 0.000501038

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001