Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.autophagy.phagophore expansion.ATG8-binding cargo receptor activities.cargo receptor protein (NBR1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_09 1 CH_aof_78 2 2 0.0000755915
Allium sativum chr8 1 CH_asa_222 3 4 0.00000031537
Allium sativum chr1 1 CH_asa_866 2 2 0.000813827
Calamus simplicifolius scaffold266 1 CH_calsi_234 2 2 0.000201396
Eragrostis curvula Contig30 1 CH_ecu_772 2 3 0.000697873
Marchantia polymorpha scaffold_39 1 CH_mpo_27 3 3 0.0000000731891
Populus trichocarpa Chr12 1 CH_ptr_476 2 3 0.000520176
Secale cereale GWHASIY00000002 1 CH_sce_784 2 3 0.000409746
Zea mays B73 9 1 CH_zma_252 2 2 0.000511313
Asparagus officinalis AsparagusV1_09 2 CH_aof_78 2 2 0.0000755915
Allium sativum chr8 2 CH_asa_222 3 4 0.00000031537
Allium sativum chr1 2 CH_asa_866 2 2 0.000813827
Calamus simplicifolius scaffold266 2 CH_calsi_234 2 2 0.000201396
Eragrostis curvula Contig30 2 CH_ecu_772 2 3 0.000697873
Marchantia polymorpha scaffold_39 2 CH_mpo_27 3 3 0.0000000731891
Populus trichocarpa Chr12 2 CH_ptr_476 2 3 0.000520176
Secale cereale GWHASIY00000002 2 CH_sce_784 2 3 0.000409746
Zea mays B73 9 2 CH_zma_252 2 2 0.000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001