Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.autophagy.nucleation complexes.auxiliary ATG6-stability component TRAF1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Dioscorea dumetorum contig89 1 CH_ddu_174 2 2 0.0000690894
Miscanthus sinensis Chr15 1 CH_msi_605 2 2 0.000676176
Miscanthus sinensis Chr14 1 CH_msi_606 2 2 0.000676176
Physcomitrium patens Chr17 1 CH_ppa_247 2 2 0.000367636
Sorghum bicolor Chr08 1 CH_sbi_386 2 2 0.000352009
Sequoiadendron giganteum chr11 1 CH_sgi_418 3 3 0.00000000355983
Solanum lycopersicum SL4.0ch06 1 CH_sly_485 2 2 0.000352164
Dioscorea dumetorum contig89 2 CH_ddu_174 2 2 0.0000690894
Miscanthus sinensis Chr15 2 CH_msi_605 2 2 0.000676176
Miscanthus sinensis Chr14 2 CH_msi_606 2 2 0.000676176
Physcomitrium patens Chr17 2 CH_ppa_247 2 2 0.000367636
Sorghum bicolor Chr08 2 CH_sbi_386 2 2 0.000352009
Sequoiadendron giganteum chr11 2 CH_sgi_418 3 3 0.00000000355983
Solanum lycopersicum SL4.0ch06 2 CH_sly_485 2 2 0.000352164

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001