Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).SUMO E3 ligase activities.E3 ligase (SIZ1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_02 1 CH_aof_119 2 2 0.000226775
Allium sativum chr8 1 CH_asa_601 2 2 0.000232522
Magnolia biondii Chr05 1 CH_mbi_630 2 7 0.000728421
Panicum hallii Chr03 1 CH_pha_229 2 2 0.0000581108
Physcomitrium patens Chr20 1 CH_ppa_282 2 2 0.000612726
Saccharum spontaneum Chr7B 1 CH_ssp_1303 2 2 0.000858922
Vanilla planifolia CM028159.1 1 CH_vpl_255 2 2 0.000221664
Zoysia japonica ssp. nagirizaki Zjn_sc00129.1 1 CH_zjn_165 2 2 0.000221971
Asparagus officinalis AsparagusV1_02 2 CH_aof_119 2 2 0.000226775
Allium sativum chr8 2 CH_asa_601 2 2 0.000232522
Magnolia biondii Chr05 2 CH_mbi_630 2 7 0.000728421
Panicum hallii Chr03 2 CH_pha_229 2 2 0.0000581108
Physcomitrium patens Chr20 2 CH_ppa_282 2 2 0.000612726
Saccharum spontaneum Chr7B 2 CH_ssp_1303 2 2 0.000858922
Vanilla planifolia CM028159.1 2 CH_vpl_255 2 2 0.000221664
Zoysia japonica ssp. nagirizaki Zjn_sc00129.1 2 CH_zjn_165 2 2 0.000221971

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001