Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.ligating E3 protein (RGLG)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_344 | 1 | CH_aag_128 | 2 | 2 | 0.00024077 |
| Amborella trichopoda | AmTr_v1.0_scaffold00061 | 1 | CH_atr_285 | 2 | 2 | 0.000476644 |
| Sequoiadendron giganteum | chr6 | 1 | CH_sgi_71 | 7 | 7 | 3.79049e-23 |
| Anthoceros agrestis | Sc2ySwM_344 | 2 | CH_aag_128 | 2 | 2 | 0.00024077 |
| Amborella trichopoda | AmTr_v1.0_scaffold00061 | 2 | CH_atr_285 | 2 | 2 | 0.000476644 |
| Sequoiadendron giganteum | chr6 | 2 | CH_sgi_71 | 7 | 7 | 3.79049e-23 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |