Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (PIR)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Elaeis guineensis EG5.1_Chr2 1 CH_egu_260 2 2 0.000568397
Oryza alta GWHAZTO00000021 1 CH_oal_667 2 2 0.000423178
Solanum lycopersicum SL4.0ch10 1 CH_sly_274 3 6 0.0000295368
Solanum lycopersicum SL4.0ch09 1 CH_sly_47 6 10 0.00000000000000564495
Selaginella moellendorffii scaffold_101 1 CH_smo_16 5 10 0.000000000000861769
Elaeis guineensis EG5.1_Chr2 2 CH_egu_260 2 2 0.000568397
Oryza alta GWHAZTO00000021 2 CH_oal_667 2 2 0.000423178
Solanum lycopersicum SL4.0ch10 2 CH_sly_274 3 6 0.0000295368
Solanum lycopersicum SL4.0ch09 2 CH_sly_47 6 10 0.00000000000000564495
Selaginella moellendorffii scaffold_101 2 CH_smo_16 5 10 0.000000000000861769

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001