Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (BRH)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG03 1 CH_aco_48 3 21 0.0000137161
Magnolia biondii Chr11 1 CH_mbi_372 3 19 0.0000684815
Sequoiadendron giganteum chr8 1 CH_sgi_688 3 13 0.0000203461
Ananas comosus LG03 2 CH_aco_48 3 21 0.0000137161
Magnolia biondii Chr11 2 CH_mbi_372 3 19 0.0000684815
Sequoiadendron giganteum chr8 2 CH_sgi_688 3 13 0.0000203461

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001