Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.HECT-type E3 ligase activities.monomeric E3 ubiquitin ligase (HECT)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Oryza alta | GWHAZTO00000005 | 1 | CH_oal_207 | 3 | 3 | 0.000000694398 |
| Panicum hallii | Chr06 | 1 | CH_pha_156 | 3 | 3 | 0.000000835799 |
| Oryza alta | GWHAZTO00000005 | 2 | CH_oal_207 | 3 | 3 | 0.000000694398 |
| Panicum hallii | Chr06 | 2 | CH_pha_156 | 3 | 3 | 0.000000835799 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |