Functional clusters

Information

  • Type MapMan
  • Description Protein modification.ADP-ribosylation.protein ADP-ribosyltransferase (PARP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00009 1 CH_atr_260 2 2 0.000238322
Ceratophyllum demersum 7 1 CH_cde_255 2 2 0.000473878
Magnolia biondii Chr18 1 CH_mbi_215 3 9 0.00000118849
Miscanthus sinensis Chr03 1 CH_msi_634 2 2 0.000901568
Miscanthus sinensis Chr06 1 CH_msi_635 2 2 0.000901568
Oryza sativa ssp. indica Chr1 1 CH_osaindica_342 2 2 0.000309965
Oryza sativa Kitaake Chr1 1 CH_osak_421 2 2 0.000337714
Oryza sativa ssp. japonica chr01 1 CH_osa_330 2 2 0.000316874
Populus trichocarpa Chr14 1 CH_ptr_455 2 2 0.000346801
Sequoiadendron giganteum chr9 1 CH_sgi_640 3 20 0.00000405653
Solanum lycopersicum SL4.0ch08 1 CH_sly_528 2 2 0.000586941
Amborella trichopoda AmTr_v1.0_scaffold00009 2 CH_atr_260 2 2 0.000238322
Ceratophyllum demersum 7 2 CH_cde_255 2 2 0.000473878
Magnolia biondii Chr18 2 CH_mbi_215 3 9 0.00000118849
Miscanthus sinensis Chr03 2 CH_msi_634 2 2 0.000901568
Miscanthus sinensis Chr06 2 CH_msi_635 2 2 0.000901568
Oryza sativa ssp. indica Chr1 2 CH_osaindica_342 2 2 0.000309965
Oryza sativa Kitaake Chr1 2 CH_osak_421 2 2 0.000337714
Oryza sativa ssp. japonica chr01 2 CH_osa_330 2 2 0.000316874
Populus trichocarpa Chr14 2 CH_ptr_455 2 2 0.000346801
Sequoiadendron giganteum chr9 2 CH_sgi_640 3 20 0.00000405653
Solanum lycopersicum SL4.0ch08 2 CH_sly_528 2 2 0.000586941

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001