Functional clusters
Information
- Type MapMan
- Description Protein modification.phosphorylation.CAMK protein kinase superfamily.SNF1-related protein kinase (SnRK3)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr3 | 1 | CH_asa_443 | 3 | 5 | 0.0000455674 |
| Aegilops tauschii | 1D | 1 | CH_ata_283 | 3 | 7 | 0.000416231 |
| Lolium perenne | Lp_chr1_0 | 1 | CH_lpe_346 | 3 | 8 | 0.00031659 |
| Secale cereale | GWHASIY00000001 | 1 | CH_sce_277 | 6 | 69 | 0.000000684812 |
| Solanum lycopersicum | SL4.0ch06 | 1 | CH_sly_163 | 4 | 6 | 0.00000015952 |
| Triticum aestivum | Chr1D | 1 | CH_tae_1292 | 3 | 5 | 0.000414645 |
| Triticum aestivum | Chr1A | 1 | CH_tae_971 | 3 | 3 | 0.0000415095 |
| Allium sativum | chr3 | 2 | CH_asa_443 | 3 | 5 | 0.0000455674 |
| Aegilops tauschii | 1D | 2 | CH_ata_283 | 3 | 7 | 0.000416231 |
| Lolium perenne | Lp_chr1_0 | 2 | CH_lpe_346 | 3 | 8 | 0.00031659 |
| Secale cereale | GWHASIY00000001 | 2 | CH_sce_277 | 6 | 69 | 0.000000684812 |
| Solanum lycopersicum | SL4.0ch06 | 2 | CH_sly_163 | 4 | 6 | 0.00000015952 |
| Triticum aestivum | Chr1D | 2 | CH_tae_1292 | 3 | 5 | 0.000414645 |
| Triticum aestivum | Chr1A | 2 | CH_tae_971 | 3 | 3 | 0.0000415095 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |