Functional clusters
Information
- Type MapMan
- Description Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (RKF3)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | AmTr_v1.0_scaffold00017 | 1 | CH_atr_230 | 3 | 34 | 0.000226105 |
Calamus simplicifolius | scaffold3 | 1 | CH_calsi_15 | 4 | 4 | 0.000000000000907729 |
Dioscorea dumetorum | contig738 | 1 | CH_ddu_301 | 2 | 2 | 0.000690894 |
Dioscorea dumetorum | contig222 | 1 | CH_ddu_302 | 2 | 2 | 0.000690894 |
Glycine max | Gm13 | 1 | CH_gma_221 | 3 | 4 | 0.00000142607 |
Marchantia polymorpha | scaffold_37 | 1 | CH_mpo_106 | 2 | 2 | 0.000331327 |
Sequoiadendron giganteum | chr5 | 1 | CH_sgi_370 | 4 | 8 | 0.00000000305775 |
Sequoiadendron giganteum | chr10 | 1 | CH_sgi_558 | 3 | 3 | 0.000000299026 |
Saccharum spontaneum | Chr3A | 1 | CH_ssp_652 | 2 | 3 | 0.000071576 |
Amborella trichopoda | AmTr_v1.0_scaffold00017 | 2 | CH_atr_230 | 3 | 34 | 0.000226105 |
Calamus simplicifolius | scaffold3 | 2 | CH_calsi_15 | 4 | 4 | 0.000000000000907729 |
Dioscorea dumetorum | contig738 | 2 | CH_ddu_301 | 2 | 2 | 0.000690894 |
Dioscorea dumetorum | contig222 | 2 | CH_ddu_302 | 2 | 2 | 0.000690894 |
Glycine max | Gm13 | 2 | CH_gma_221 | 3 | 4 | 0.00000142607 |
Marchantia polymorpha | scaffold_37 | 2 | CH_mpo_106 | 2 | 2 | 0.000331327 |
Sequoiadendron giganteum | chr5 | 2 | CH_sgi_370 | 4 | 8 | 0.00000000305775 |
Sequoiadendron giganteum | chr10 | 2 | CH_sgi_558 | 3 | 3 | 0.000000299026 |
Saccharum spontaneum | Chr3A | 2 | CH_ssp_652 | 2 | 3 | 0.000071576 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |