Functional clusters
Information
- Type MapMan
- Description Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LysM)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00022 | 1 | CH_atr_90 | 4 | 9 | 0.000000135292 |
| Populus trichocarpa | Chr05 | 1 | CH_ptr_283 | 3 | 4 | 0.0000308568 |
| Sequoiadendron giganteum | chr6 | 1 | CH_sgi_340 | 4 | 5 | 0.000000000631272 |
| Sequoiadendron giganteum | chr10 | 1 | CH_sgi_619 | 3 | 3 | 0.00000199351 |
| Triticum aestivum | Chr2D | 1 | CH_tae_768 | 3 | 3 | 0.00000407856 |
| Vanilla planifolia | CM028152.1 | 1 | CH_vpl_99 | 3 | 5 | 0.00000687635 |
| Amborella trichopoda | AmTr_v1.0_scaffold00022 | 2 | CH_atr_90 | 4 | 9 | 0.000000135292 |
| Populus trichocarpa | Chr05 | 2 | CH_ptr_283 | 3 | 4 | 0.0000308568 |
| Sequoiadendron giganteum | chr6 | 2 | CH_sgi_340 | 4 | 5 | 0.000000000631272 |
| Sequoiadendron giganteum | chr10 | 2 | CH_sgi_619 | 3 | 3 | 0.00000199351 |
| Triticum aestivum | Chr2D | 2 | CH_tae_768 | 3 | 3 | 0.00000407856 |
| Vanilla planifolia | CM028152.1 | 2 | CH_vpl_99 | 3 | 5 | 0.00000687635 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |