Functional clusters

Information

  • Type MapMan
  • Description Protein modification.glycosylation.O-linked glycosylation.hydroxyproline O-linked glycosylation.hydroxyproline-O-arabinosyltransferase (HPAT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr1 1 CH_asa_153 5 17 0.0000000148437
Miscanthus sinensis Chr05 1 CH_msi_597 2 2 0.000676176
Saccharum spontaneum Chr3D 1 CH_ssp_1317 2 2 0.000858922
Zostera marina Chr01 1 CH_zosmarina_230 2 2 0.000965577
Allium sativum chr1 2 CH_asa_153 5 17 0.0000000148437
Miscanthus sinensis Chr05 2 CH_msi_597 2 2 0.000676176
Saccharum spontaneum Chr3D 2 CH_ssp_1317 2 2 0.000858922
Zostera marina Chr01 2 CH_zosmarina_230 2 2 0.000965577

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001