Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor activity.mRNA-translocation factor (eEF2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyon Bd3 1 CH_bdi_264 3 41 0.000242741
Glycine max Gm15 1 CH_gma_386 2 2 0.000113867
Hordeum vulgare chr5H 1 CH_hvu_128 3 3 0.0000000247059
Panicum hallii Chr05 1 CH_pha_401 2 2 0.000581108
Physcomitrium patens Chr11 1 CH_ppa_44 3 9 0.00000189163
Populus trichocarpa Chr07 1 CH_ptr_386 2 2 0.0001734
Sorghum bicolor Chr01 1 CH_sbi_385 2 2 0.000352009
Secale cereale GWHASIY00000007 1 CH_sce_964 2 2 0.00095611
Solanum lycopersicum SL4.0ch08 1 CH_sly_340 2 2 0.0000586941
Saccharum spontaneum Chr1D 1 CH_ssp_1194 2 2 0.00066805
Setaria viridis Chr_05 1 CH_svi_401 2 4 0.000313054
Triticum aestivum Chr4A 1 CH_tae_589 3 3 0.00000029395
Triticum aestivum Chr5B 1 CH_tae_590 3 3 0.00000029395
Triticum dicoccoides 4A 1 CH_tdi_192 3 3 0.000000218101
Triticum dicoccoides 5B 1 CH_tdi_193 3 3 0.000000218101
Zea mays B73 1 1 CH_zma_77 3 6 0.000000313695
Zostera marina Chr01 1 CH_zosmarina_198 2 4 0.00057929
Brachypodium distachyon Bd3 2 CH_bdi_264 3 41 0.000242741
Glycine max Gm15 2 CH_gma_386 2 2 0.000113867
Hordeum vulgare chr5H 2 CH_hvu_128 3 3 0.0000000247059
Panicum hallii Chr05 2 CH_pha_401 2 2 0.000581108
Physcomitrium patens Chr11 2 CH_ppa_44 3 9 0.00000189163
Populus trichocarpa Chr07 2 CH_ptr_386 2 2 0.0001734
Sorghum bicolor Chr01 2 CH_sbi_385 2 2 0.000352009
Secale cereale GWHASIY00000007 2 CH_sce_964 2 2 0.00095611
Solanum lycopersicum SL4.0ch08 2 CH_sly_340 2 2 0.0000586941
Saccharum spontaneum Chr1D 2 CH_ssp_1194 2 2 0.00066805
Setaria viridis Chr_05 2 CH_svi_401 2 4 0.000313054
Triticum aestivum Chr4A 2 CH_tae_589 3 3 0.00000029395
Triticum aestivum Chr5B 2 CH_tae_590 3 3 0.00000029395
Triticum dicoccoides 4A 2 CH_tdi_192 3 3 0.000000218101
Triticum dicoccoides 5B 2 CH_tdi_193 3 3 0.000000218101
Zea mays B73 1 2 CH_zma_77 3 6 0.000000313695
Zostera marina Chr01 2 CH_zosmarina_198 2 4 0.00057929

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001