Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.SMG1C protein kinase complex.kinase component SMG1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Calamus simplicifolius scaffold523 1 CH_calsi_162 2 2 0.0000671321
Miscanthus sinensis Chr02 1 CH_msi_426 2 2 0.000193193
Miscanthus sinensis Chr01 1 CH_msi_427 2 2 0.000193193
Sequoiadendron giganteum chr2 1 CH_sgi_819 2 2 0.0000487151
Triticum dicoccoides 4A 1 CH_tdi_404 2 2 0.0000890551
Vanilla planifolia CM028155.1 1 CH_vpl_258 2 2 0.000221664
Calamus simplicifolius scaffold523 2 CH_calsi_162 2 2 0.0000671321
Miscanthus sinensis Chr02 2 CH_msi_426 2 2 0.000193193
Miscanthus sinensis Chr01 2 CH_msi_427 2 2 0.000193193
Sequoiadendron giganteum chr2 2 CH_sgi_819 2 2 0.0000487151
Triticum dicoccoides 4A 2 CH_tdi_404 2 2 0.0000890551
Vanilla planifolia CM028155.1 2 CH_vpl_258 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001