Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (RRP5)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG07 1 CH_aco_122 2 4 0.000497636
Ceratophyllum demersum 1 1 CH_cde_79 2 2 0.0000789796
Dioscorea dumetorum contig89 1 CH_ddu_160 2 2 0.0000690894
Digitaria exilis Dexi_CM05836_chr02A 1 CH_dex_429 2 2 0.000100261
Oryza sativa ssp. japonica chr07 1 CH_osa_199 2 2 0.0000528123
Sequoiadendron giganteum chr7 1 CH_sgi_215 4 4 0.000000000000346852
Zea mays B73 7 1 CH_zma_245 2 5 0.000511274
Ananas comosus LG07 2 CH_aco_122 2 4 0.000497636
Ceratophyllum demersum 1 2 CH_cde_79 2 2 0.0000789796
Dioscorea dumetorum contig89 2 CH_ddu_160 2 2 0.0000690894
Digitaria exilis Dexi_CM05836_chr02A 2 CH_dex_429 2 2 0.000100261
Oryza sativa ssp. japonica chr07 2 CH_osa_199 2 2 0.0000528123
Sequoiadendron giganteum chr7 2 CH_sgi_215 4 4 0.000000000000346852
Zea mays B73 7 2 CH_zma_245 2 5 0.000511274

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001