Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpC module.assembly factor (RRP7)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr4 | 1 | CH_asa_159 | 3 | 5 | 0.0000000225273 |
| Magnolia biondii | Chr15 | 1 | CH_mbi_393 | 2 | 3 | 0.000145695 |
| Saccharum spontaneum | Chr4D | 1 | CH_ssp_1049 | 2 | 4 | 0.000429444 |
| Allium sativum | chr4 | 2 | CH_asa_159 | 3 | 5 | 0.0000000225273 |
| Magnolia biondii | Chr15 | 2 | CH_mbi_393 | 2 | 3 | 0.000145695 |
| Saccharum spontaneum | Chr4D | 2 | CH_ssp_1049 | 2 | 4 | 0.000429444 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |