Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS6

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ceratophyllum demersum 2 1 CH_cde_55 3 6 0.00000374137
Hordeum vulgare chr2H 1 CH_hvu_385 2 3 0.00036524
Oropetium thomaeum Chromosome_7 1 CH_oth_139 2 2 0.0000711845
Physcomitrium patens Chr15 1 CH_ppa_64 3 13 0.0000160943
Secale cereale GWHASIY00000002 1 CH_sce_138 4 14 0.00000000141659
Saccharum spontaneum Chr2C 1 CH_ssp_1122 2 2 0.000501038
Triticum aestivum Chr2B 1 CH_tae_1394 2 2 0.000673438
Triticum aestivum Chr2A 1 CH_tae_1395 2 2 0.000673438
Triticum aestivum Chr2D 1 CH_tae_1396 2 2 0.000673438
Triticum dicoccoides 2A 1 CH_tdi_523 2 2 0.000445276
Triticum dicoccoides 2B 1 CH_tdi_524 2 2 0.000445276
Triticum turgidum chr2A 1 CH_ttu_655 2 2 0.000468801
Triticum turgidum chr2B 1 CH_ttu_656 2 2 0.000468801
Ceratophyllum demersum 2 2 CH_cde_55 3 6 0.00000374137
Hordeum vulgare chr2H 2 CH_hvu_385 2 3 0.00036524
Oropetium thomaeum Chromosome_7 2 CH_oth_139 2 2 0.0000711845
Physcomitrium patens Chr15 2 CH_ppa_64 3 13 0.0000160943
Secale cereale GWHASIY00000002 2 CH_sce_138 4 14 0.00000000141659
Saccharum spontaneum Chr2C 2 CH_ssp_1122 2 2 0.000501038
Triticum aestivum Chr2B 2 CH_tae_1394 2 2 0.000673438
Triticum aestivum Chr2A 2 CH_tae_1395 2 2 0.000673438
Triticum aestivum Chr2D 2 CH_tae_1396 2 2 0.000673438
Triticum dicoccoides 2A 2 CH_tdi_523 2 2 0.000445276
Triticum dicoccoides 2B 2 CH_tdi_524 2 2 0.000445276
Triticum turgidum chr2A 2 CH_ttu_655 2 2 0.000468801
Triticum turgidum chr2B 2 CH_ttu_656 2 2 0.000468801

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001