Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS27

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_368 1 CH_aag_153 2 4 0.000481502
Arabidopsis thaliana Chr3 1 CH_ath_307 2 2 0.000171895
Calamus simplicifolius scaffold61 1 CH_calsi_301 3 12 0.000539854
Glycine max Gm02 1 CH_gma_503 2 2 0.000379557
Magnolia biondii Chr07 1 CH_mbi_555 2 3 0.000437077
Miscanthus sinensis Chr01 1 CH_msi_137 3 3 0.0000000544311
Miscanthus sinensis Chr02 1 CH_msi_596 2 2 0.000676176
Sorghum bicolor Chr01 1 CH_sbi_374 2 2 0.000352009
Sorghum bicolor Chr04 1 CH_sbi_375 2 2 0.000352009
Solanum lycopersicum SL4.0ch01 1 CH_sly_543 2 2 0.000880411
Zostera marina Chr04 1 CH_zosmarina_82 3 9 0.00000469683
Anthoceros agrestis Sc2ySwM_368 2 CH_aag_153 2 4 0.000481502
Arabidopsis thaliana Chr3 2 CH_ath_307 2 2 0.000171895
Calamus simplicifolius scaffold61 2 CH_calsi_301 3 12 0.000539854
Glycine max Gm02 2 CH_gma_503 2 2 0.000379557
Magnolia biondii Chr07 2 CH_mbi_555 2 3 0.000437077
Miscanthus sinensis Chr01 2 CH_msi_137 3 3 0.0000000544311
Miscanthus sinensis Chr02 2 CH_msi_596 2 2 0.000676176
Sorghum bicolor Chr01 2 CH_sbi_374 2 2 0.000352009
Sorghum bicolor Chr04 2 CH_sbi_375 2 2 0.000352009
Solanum lycopersicum SL4.0ch01 2 CH_sly_543 2 2 0.000880411
Zostera marina Chr04 2 CH_zosmarina_82 3 9 0.00000469683

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001