Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS19

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyon Bd3 1 CH_bdi_279 2 2 0.000370005
Brachypodium distachyon Bd4 1 CH_bdi_280 2 2 0.000370005
Elaeis guineensis EG5.1_Chr1 1 CH_egu_266 2 2 0.000568397
Oryza sativa ssp. indica Chr3 1 CH_osaindica_315 2 4 0.000309949
Oryza sativa Kitaake Chr3 1 CH_osak_345 2 3 0.000168852
Oryza sativa ssp. japonica chr03 1 CH_osa_255 2 3 0.000158433
Phyllostachys edulis hic_scaffold_3 1 CH_ped_382 2 2 0.000244474
Brachypodium distachyon Bd3 2 CH_bdi_279 2 2 0.000370005
Brachypodium distachyon Bd4 2 CH_bdi_280 2 2 0.000370005
Elaeis guineensis EG5.1_Chr1 2 CH_egu_266 2 2 0.000568397
Oryza sativa ssp. indica Chr3 2 CH_osaindica_315 2 4 0.000309949
Oryza sativa Kitaake Chr3 2 CH_osak_345 2 3 0.000168852
Oryza sativa ssp. japonica chr03 2 CH_osa_255 2 3 0.000158433
Phyllostachys edulis hic_scaffold_3 2 CH_ped_382 2 2 0.000244474

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001