Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.PES-BOP1-WDR12 (PeBoW) complex.component BOP1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_10 1 CH_aof_113 2 2 0.000226775
Allium sativum chr1 1 CH_asa_356 2 2 0.0000387537
Amborella trichopoda AmTr_v1.0_scaffold00024 1 CH_atr_283 2 2 0.000476644
Amborella trichopoda AmTr_v1.0_scaffold00007 1 CH_atr_284 2 2 0.000476644
Vanilla planifolia CM028155.1 1 CH_vpl_139 2 2 0.000073888
Asparagus officinalis AsparagusV1_10 2 CH_aof_113 2 2 0.000226775
Allium sativum chr1 2 CH_asa_356 2 2 0.0000387537
Amborella trichopoda AmTr_v1.0_scaffold00024 2 CH_atr_283 2 2 0.000476644
Amborella trichopoda AmTr_v1.0_scaffold00007 2 CH_atr_284 2 2 0.000476644
Vanilla planifolia CM028155.1 2 CH_vpl_139 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001