Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 1 CH_aag_186 2 5 0.000802472
Allium sativum chr3 1 CH_asa_271 3 8 0.00000252236
Oropetium thomaeum Chromosome_1 1 CH_oth_182 2 3 0.000213546
Populus trichocarpa Chr06 1 CH_ptr_474 2 3 0.000520176
Spirodela polyrhiza pseudo3 1 CH_spo_132 2 2 0.000101921
Saccharum spontaneum Chr2D 1 CH_ssp_302 3 4 0.000000563516
Anthoceros agrestis Sc2ySwM_228 2 CH_aag_186 2 5 0.000802472
Allium sativum chr3 2 CH_asa_271 3 8 0.00000252236
Oropetium thomaeum Chromosome_1 2 CH_oth_182 2 3 0.000213546
Populus trichocarpa Chr06 2 CH_ptr_474 2 3 0.000520176
Spirodela polyrhiza pseudo3 2 CH_spo_132 2 2 0.000101921
Saccharum spontaneum Chr2D 2 CH_ssp_302 3 4 0.000000563516

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001