Functional clusters

Information

  • Type MapMan
  • Description RNA processing.mRNA silencing.miRNA pathway.pri-miRNA recruitment factor (STV1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Elaeis guineensis EG5.1_Chr12 1 CH_egu_280 2 2 0.000568397
Hordeum vulgare chr5H 1 CH_hvu_327 2 2 0.000121751
Oropetium thomaeum Chromosome_3 1 CH_oth_251 2 3 0.000640623
Physcomitrium patens Chr04 1 CH_ppa_334 2 2 0.000919089
Populus trichocarpa Chr12 1 CH_ptr_510 2 2 0.000578001
Triticum aestivum Chr5A 1 CH_tae_1319 2 2 0.000523785
Triticum aestivum Chr5B 1 CH_tae_1320 2 2 0.000523785
Triticum turgidum chr5A 1 CH_ttu_615 2 2 0.000312534
Elaeis guineensis EG5.1_Chr12 2 CH_egu_280 2 2 0.000568397
Hordeum vulgare chr5H 2 CH_hvu_327 2 2 0.000121751
Oropetium thomaeum Chromosome_3 2 CH_oth_251 2 3 0.000640623
Physcomitrium patens Chr04 2 CH_ppa_334 2 2 0.000919089
Populus trichocarpa Chr12 2 CH_ptr_510 2 2 0.000578001
Triticum aestivum Chr5A 2 CH_tae_1319 2 2 0.000523785
Triticum aestivum Chr5B 2 CH_tae_1320 2 2 0.000523785
Triticum turgidum chr5A 2 CH_ttu_615 2 2 0.000312534

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001