Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.nuclease component CPSF73-I

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Calamus simplicifolius scaffold111 1 CH_calsi_161 2 2 0.0000671321
Magnolia biondii Chr04 1 CH_mbi_327 2 2 0.0000485661
Miscanthus sinensis Chr01 1 CH_msi_305 2 2 0.0000321989
Populus trichocarpa Chr17 1 CH_ptr_135 3 3 0.00000000501143
Sequoiadendron giganteum chr11 1 CH_sgi_811 2 2 0.0000487151
Saccharum spontaneum Chr1A 1 CH_ssp_1232 2 3 0.000715743
Saccharum spontaneum Chr1D 1 CH_ssp_892 2 2 0.000238589
Zostera marina Chr02 1 CH_zosmarina_116 2 2 0.0000965577
Calamus simplicifolius scaffold111 2 CH_calsi_161 2 2 0.0000671321
Magnolia biondii Chr04 2 CH_mbi_327 2 2 0.0000485661
Miscanthus sinensis Chr01 2 CH_msi_305 2 2 0.0000321989
Populus trichocarpa Chr17 2 CH_ptr_135 3 3 0.00000000501143
Sequoiadendron giganteum chr11 2 CH_sgi_811 2 2 0.0000487151
Saccharum spontaneum Chr1A 2 CH_ssp_1232 2 3 0.000715743
Saccharum spontaneum Chr1D 2 CH_ssp_892 2 2 0.000238589
Zostera marina Chr02 2 CH_zosmarina_116 2 2 0.0000965577

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001