Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Sub2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr5 1 CH_ath_418 2 8 0.000802108
Brachypodium distachyon Bd2 1 CH_bdi_67 3 4 0.0000000228173
Oryza brachyantha 1 1 CH_obr_214 2 3 0.000179195
Oryza sativa ssp. indica Chr1 1 CH_osaindica_389 2 6 0.000774833
Oryza sativa Kitaake Chr1 1 CH_osak_295 2 2 0.0000562857
Oryza sativa ssp. japonica chr01 1 CH_osa_203 2 2 0.0000528123
Arabidopsis thaliana Chr5 2 CH_ath_418 2 8 0.000802108
Brachypodium distachyon Bd2 2 CH_bdi_67 3 4 0.0000000228173
Oryza brachyantha 1 2 CH_obr_214 2 3 0.000179195
Oryza sativa ssp. indica Chr1 2 CH_osaindica_389 2 6 0.000774833
Oryza sativa Kitaake Chr1 2 CH_osak_295 2 2 0.0000562857
Oryza sativa ssp. japonica chr01 2 CH_osa_203 2 2 0.0000528123

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001