Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (NSR)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Oryza sativa ssp. indica Chr9 1 CH_osaindica_333 2 2 0.000309965
Oryza sativa Kitaake Chr9 1 CH_osak_456 2 2 0.000562857
Oryza sativa ssp. japonica chr09 1 CH_osa_320 2 2 0.000316874
Sequoiadendron giganteum chr4 1 CH_sgi_1315 2 2 0.000487151
Solanum lycopersicum SL4.0ch06 1 CH_sly_218 3 3 0.00000235128
Solanum lycopersicum SL4.0ch06 1 CH_sly_4 10 10 1.76139e-31
Oryza sativa ssp. indica Chr9 2 CH_osaindica_333 2 2 0.000309965
Oryza sativa Kitaake Chr9 2 CH_osak_456 2 2 0.000562857
Oryza sativa ssp. japonica chr09 2 CH_osa_320 2 2 0.000316874
Sequoiadendron giganteum chr4 2 CH_sgi_1315 2 2 0.000487151
Solanum lycopersicum SL4.0ch06 2 CH_sly_218 3 3 0.00000235128
Solanum lycopersicum SL4.0ch06 2 CH_sly_4 10 10 1.76139e-31

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001