Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (PRPF4)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr1 1 CH_asa_615 2 2 0.000232522
Oryza sativa ssp. indica Chr3 1 CH_osaindica_265 2 3 0.000154979
Oryza sativa Kitaake Chr3 1 CH_osak_344 2 3 0.000168852
Oryza sativa ssp. japonica chr03 1 CH_osa_254 2 3 0.000158433
Allium sativum chr1 2 CH_asa_615 2 2 0.000232522
Oryza sativa ssp. indica Chr3 2 CH_osaindica_265 2 3 0.000154979
Oryza sativa Kitaake Chr3 2 CH_osak_344 2 3 0.000168852
Oryza sativa ssp. japonica chr03 2 CH_osa_254 2 3 0.000158433

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001