Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (PRP39)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ceratophyllum demersum 3 1 CH_cde_214 2 2 0.000473878
Oryza alta GWHAZTO00000003 1 CH_oal_560 2 2 0.000201513
Sequoiadendron giganteum chr8 1 CH_sgi_1059 2 2 0.000146145
Saccharum spontaneum Chr1B 1 CH_ssp_700 3 52 0.0000754062
Ceratophyllum demersum 3 2 CH_cde_214 2 2 0.000473878
Oryza alta GWHAZTO00000003 2 CH_oal_560 2 2 0.000201513
Sequoiadendron giganteum chr8 2 CH_sgi_1059 2 2 0.000146145
Saccharum spontaneum Chr1B 2 CH_ssp_700 3 52 0.0000754062

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001