Functional clusters
Information
- Type MapMan
- Description RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.basal splicing factor (RH3)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Lolium perenne | Lp_chr4_0 | 1 | CH_lpe_407 | 2 | 7 | 0.000674937 |
| Populus trichocarpa | Chr05 | 1 | CH_ptr_529 | 2 | 6 | 0.000866902 |
| Lolium perenne | Lp_chr4_0 | 2 | CH_lpe_407 | 2 | 7 | 0.000674937 |
| Populus trichocarpa | Chr05 | 2 | CH_ptr_529 | 2 | 6 | 0.000866902 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |