Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.organelle machinery.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Digitaria exilis Dexi_CM05836_chr02B 1 CH_dex_637 2 2 0.000501303
Elaeis guineensis p5_sc00044 1 CH_egu_278 2 2 0.000568397
Musa acuminata chr01 1 CH_mac_22 4 4 0.00000000000825489
Oropetium thomaeum Chromosome_2 1 CH_oth_205 2 2 0.000213554
Phyllostachys edulis hic_scaffold_3 1 CH_ped_53 4 4 0.00000000000710329
Secale cereale GWHASIY00000006 1 CH_sce_845 2 2 0.00045529
Solanum lycopersicum SL4.0ch02 1 CH_sly_484 2 2 0.000352164
Saccharum spontaneum Chr8D 1 CH_ssp_213 3 3 0.0000000717263
Digitaria exilis Dexi_CM05836_chr02B 2 CH_dex_637 2 2 0.000501303
Elaeis guineensis p5_sc00044 2 CH_egu_278 2 2 0.000568397
Musa acuminata chr01 2 CH_mac_22 4 4 0.00000000000825489
Oropetium thomaeum Chromosome_2 2 CH_oth_205 2 2 0.000213554
Phyllostachys edulis hic_scaffold_3 2 CH_ped_53 4 4 0.00000000000710329
Secale cereale GWHASIY00000006 2 CH_sce_845 2 2 0.00045529
Solanum lycopersicum SL4.0ch02 2 CH_sly_484 2 2 0.000352164
Saccharum spontaneum Chr8D 2 CH_ssp_213 3 3 0.0000000717263

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001