Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Magnolia biondii | Chr08 | 1 | CH_mbi_391 | 3 | 7 | 0.000140981 |
| Oryza sativa ssp. indica | Chr6 | 1 | CH_osaindica_187 | 3 | 3 | 0.0000117099 |
| Sequoiadendron giganteum | chr9 | 1 | CH_sgi_157 | 7 | 12 | 0.00000000000000218695 |
| Saccharum spontaneum | Chr7A | 1 | CH_ssp_595 | 4 | 16 | 0.000035926 |
| Magnolia biondii | Chr08 | 2 | CH_mbi_391 | 3 | 7 | 0.000140981 |
| Oryza sativa ssp. indica | Chr6 | 2 | CH_osaindica_187 | 3 | 3 | 0.0000117099 |
| Sequoiadendron giganteum | chr9 | 2 | CH_sgi_157 | 7 | 12 | 0.00000000000000218695 |
| Saccharum spontaneum | Chr7A | 2 | CH_ssp_595 | 4 | 16 | 0.000035926 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |