Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.NIN-like transcription factor superfamily.transcription factor (NLP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 1 CH_aag_105 2 2 0.0000802568
Allium sativum chr2 1 CH_asa_245 3 6 0.000000900956
Oryza alta GWHAZTO00000011 1 CH_oal_190 3 3 0.000000341108
Populus trichocarpa Chr17 1 CH_ptr_69 6 14 0.000000000000807319
Sequoiadendron giganteum chr3 1 CH_sgi_486 3 3 0.0000000355983
Selaginella moellendorffii scaffold_59 1 CH_smo_149 2 2 0.000560224
Vanilla planifolia CM028150.1 1 CH_vpl_88 3 11 0.00000540224
Anthoceros agrestis Sc2ySwM_228 2 CH_aag_105 2 2 0.0000802568
Allium sativum chr2 2 CH_asa_245 3 6 0.000000900956
Oryza alta GWHAZTO00000011 2 CH_oal_190 3 3 0.000000341108
Populus trichocarpa Chr17 2 CH_ptr_69 6 14 0.000000000000807319
Sequoiadendron giganteum chr3 2 CH_sgi_486 3 3 0.0000000355983
Selaginella moellendorffii scaffold_59 2 CH_smo_149 2 2 0.000560224
Vanilla planifolia CM028150.1 2 CH_vpl_88 3 11 0.00000540224

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001