Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.NIN-like transcription factor superfamily.transcription factor (RKD)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 2D | 1 | CH_ata_240 | 2 | 2 | 0.000147725 |
| Eragrostis curvula | 1 | 1 | CH_ecu_230 | 3 | 3 | 0.00000002255 |
| Hordeum vulgare | chr2H | 1 | CH_hvu_404 | 2 | 2 | 0.000405836 |
| Secale cereale | GWHASIY00000002 | 1 | CH_sce_733 | 2 | 2 | 0.000273174 |
| Selaginella moellendorffii | scaffold_15 | 1 | CH_smo_4 | 7 | 8 | 1.43321e-18 |
| Triticum dicoccoides | 2A | 1 | CH_tdi_457 | 2 | 2 | 0.00017811 |
| Triticum dicoccoides | 2B | 1 | CH_tdi_458 | 2 | 2 | 0.00017811 |
| Triticum turgidum | chr2A | 1 | CH_ttu_728 | 2 | 2 | 0.000875096 |
| Aegilops tauschii | 2D | 2 | CH_ata_240 | 2 | 2 | 0.000147725 |
| Eragrostis curvula | 1 | 2 | CH_ecu_230 | 3 | 3 | 0.00000002255 |
| Hordeum vulgare | chr2H | 2 | CH_hvu_404 | 2 | 2 | 0.000405836 |
| Secale cereale | GWHASIY00000002 | 2 | CH_sce_733 | 2 | 2 | 0.000273174 |
| Selaginella moellendorffii | scaffold_15 | 2 | CH_smo_4 | 7 | 8 | 1.43321e-18 |
| Triticum dicoccoides | 2A | 2 | CH_tdi_457 | 2 | 2 | 0.00017811 |
| Triticum dicoccoides | 2B | 2 | CH_tdi_458 | 2 | 2 | 0.00017811 |
| Triticum turgidum | chr2A | 2 | CH_ttu_728 | 2 | 2 | 0.000875096 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |