Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YC

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr2 1 CH_asa_170 4 12 0.0000000284944
Aegilops tauschii 7D 1 CH_ata_247 3 13 0.000171344
Aegilops tauschii 1D 1 CH_ata_256 3 14 0.000218037
Arabidopsis thaliana Chr5 1 CH_ath_173 3 5 0.00000147715
Brachypodium distachyon Bd3 1 CH_bdi_47 4 4 0.000000000147757
Glycine max Gm13 1 CH_gma_204 3 3 0.000000786602
Hordeum vulgare chr7H 1 CH_hvu_287 3 14 0.0000503072
Magnolia biondii Chr17 1 CH_mbi_29 7 28 4.02987e-16
Secale cereale GWHASIY00000007 1 CH_sce_666 3 13 0.000195299
Solanum lycopersicum SL4.0ch03 1 CH_sly_109 6 63 0.000000000974194
Triticum aestivum Chr7D 1 CH_tae_1267 3 12 0.000377686
Triticum aestivum Chr7B 1 CH_tae_539 4 11 0.000000132521
Triticum turgidum chr7B 1 CH_ttu_97 5 12 0.0000000000484992
Zea mays B104 scaffold8.1927 1 CH_zma-b104_29 2 2 0.000304785
Allium sativum chr2 2 CH_asa_170 4 12 0.0000000284944
Aegilops tauschii 7D 2 CH_ata_247 3 13 0.000171344
Aegilops tauschii 1D 2 CH_ata_256 3 14 0.000218037
Arabidopsis thaliana Chr5 2 CH_ath_173 3 5 0.00000147715
Brachypodium distachyon Bd3 2 CH_bdi_47 4 4 0.000000000147757
Glycine max Gm13 2 CH_gma_204 3 3 0.000000786602
Hordeum vulgare chr7H 2 CH_hvu_287 3 14 0.0000503072
Magnolia biondii Chr17 2 CH_mbi_29 7 28 4.02987e-16
Secale cereale GWHASIY00000007 2 CH_sce_666 3 13 0.000195299
Solanum lycopersicum SL4.0ch03 2 CH_sly_109 6 63 0.000000000974194
Triticum aestivum Chr7D 2 CH_tae_1267 3 12 0.000377686
Triticum aestivum Chr7B 2 CH_tae_539 4 11 0.000000132521
Triticum turgidum chr7B 2 CH_ttu_97 5 12 0.0000000000484992
Zea mays B104 scaffold8.1927 2 CH_zma-b104_29 2 2 0.000304785

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001