Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YC
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Allium sativum | chr2 | 1 | CH_asa_170 | 4 | 12 | 0.0000000284944 |
Aegilops tauschii | 7D | 1 | CH_ata_247 | 3 | 13 | 0.000171344 |
Aegilops tauschii | 1D | 1 | CH_ata_256 | 3 | 14 | 0.000218037 |
Arabidopsis thaliana | Chr5 | 1 | CH_ath_173 | 3 | 5 | 0.00000147715 |
Brachypodium distachyon | Bd3 | 1 | CH_bdi_47 | 4 | 4 | 0.000000000147757 |
Glycine max | Gm13 | 1 | CH_gma_204 | 3 | 3 | 0.000000786602 |
Hordeum vulgare | chr7H | 1 | CH_hvu_287 | 3 | 14 | 0.0000503072 |
Magnolia biondii | Chr17 | 1 | CH_mbi_29 | 7 | 28 | 4.02987e-16 |
Secale cereale | GWHASIY00000007 | 1 | CH_sce_666 | 3 | 13 | 0.000195299 |
Solanum lycopersicum | SL4.0ch03 | 1 | CH_sly_109 | 6 | 63 | 0.000000000974194 |
Triticum aestivum | Chr7D | 1 | CH_tae_1267 | 3 | 12 | 0.000377686 |
Triticum aestivum | Chr7B | 1 | CH_tae_539 | 4 | 11 | 0.000000132521 |
Triticum turgidum | chr7B | 1 | CH_ttu_97 | 5 | 12 | 0.0000000000484992 |
Zea mays B104 | scaffold8.1927 | 1 | CH_zma-b104_29 | 2 | 2 | 0.000304785 |
Allium sativum | chr2 | 2 | CH_asa_170 | 4 | 12 | 0.0000000284944 |
Aegilops tauschii | 7D | 2 | CH_ata_247 | 3 | 13 | 0.000171344 |
Aegilops tauschii | 1D | 2 | CH_ata_256 | 3 | 14 | 0.000218037 |
Arabidopsis thaliana | Chr5 | 2 | CH_ath_173 | 3 | 5 | 0.00000147715 |
Brachypodium distachyon | Bd3 | 2 | CH_bdi_47 | 4 | 4 | 0.000000000147757 |
Glycine max | Gm13 | 2 | CH_gma_204 | 3 | 3 | 0.000000786602 |
Hordeum vulgare | chr7H | 2 | CH_hvu_287 | 3 | 14 | 0.0000503072 |
Magnolia biondii | Chr17 | 2 | CH_mbi_29 | 7 | 28 | 4.02987e-16 |
Secale cereale | GWHASIY00000007 | 2 | CH_sce_666 | 3 | 13 | 0.000195299 |
Solanum lycopersicum | SL4.0ch03 | 2 | CH_sly_109 | 6 | 63 | 0.000000000974194 |
Triticum aestivum | Chr7D | 2 | CH_tae_1267 | 3 | 12 | 0.000377686 |
Triticum aestivum | Chr7B | 2 | CH_tae_539 | 4 | 11 | 0.000000132521 |
Triticum turgidum | chr7B | 2 | CH_ttu_97 | 5 | 12 | 0.0000000000484992 |
Zea mays B104 | scaffold8.1927 | 2 | CH_zma-b104_29 | 2 | 2 | 0.000304785 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |