Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.transcription factor (SRS)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr6 1 CH_asa_809 2 2 0.000581305
Allium sativum chr4 1 CH_asa_810 2 2 0.000581305
Calamus simplicifolius scaffold87 1 CH_calsi_252 2 2 0.000201396
Cenchrus purpureus GWHAORA00000002 1 CH_cpu_757 3 15 0.000364533
Magnolia biondii Chr13 1 CH_mbi_537 2 2 0.000291397
Saccharum spontaneum Chr2D 1 CH_ssp_416 4 25 0.00000307366
Saccharum spontaneum Chr2C 1 CH_ssp_607 3 7 0.0000397208
Allium sativum chr6 2 CH_asa_809 2 2 0.000581305
Allium sativum chr4 2 CH_asa_810 2 2 0.000581305
Calamus simplicifolius scaffold87 2 CH_calsi_252 2 2 0.000201396
Cenchrus purpureus GWHAORA00000002 2 CH_cpu_757 3 15 0.000364533
Magnolia biondii Chr13 2 CH_mbi_537 2 2 0.000291397
Saccharum spontaneum Chr2D 2 CH_ssp_416 4 25 0.00000307366
Saccharum spontaneum Chr2C 2 CH_ssp_607 3 7 0.0000397208

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001