Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.transcription factor (FRS/FRF)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brachypodium distachyon | Bd3 | 1 | CH_bdi_137 | 4 | 5 | 0.00000645201 |
| Magnolia biondii | Chr15 | 1 | CH_mbi_383 | 3 | 3 | 0.00011502 |
| Oryza alta | GWHAZTO00000006 | 1 | CH_oal_797 | 3 | 3 | 0.000861851 |
| Panicum hallii | Chr01 | 1 | CH_pha_270 | 4 | 8 | 0.0000953433 |
| Populus trichocarpa | Chr07 | 1 | CH_ptr_139 | 5 | 8 | 0.00000000571126 |
| Populus trichocarpa | Chr03 | 1 | CH_ptr_327 | 3 | 3 | 0.0000711121 |
| Setaria viridis | Chr_07 | 1 | CH_svi_295 | 3 | 3 | 0.000061995 |
| Zostera marina | Chr06 | 1 | CH_zosmarina_104 | 3 | 5 | 0.0000508627 |
| Brachypodium distachyon | Bd3 | 2 | CH_bdi_137 | 4 | 5 | 0.00000645201 |
| Magnolia biondii | Chr15 | 2 | CH_mbi_383 | 3 | 3 | 0.00011502 |
| Oryza alta | GWHAZTO00000006 | 2 | CH_oal_797 | 3 | 3 | 0.000861851 |
| Panicum hallii | Chr01 | 2 | CH_pha_270 | 4 | 8 | 0.0000953433 |
| Populus trichocarpa | Chr07 | 2 | CH_ptr_139 | 5 | 8 | 0.00000000571126 |
| Populus trichocarpa | Chr03 | 2 | CH_ptr_327 | 3 | 3 | 0.0000711121 |
| Setaria viridis | Chr_07 | 2 | CH_svi_295 | 3 | 3 | 0.000061995 |
| Zostera marina | Chr06 | 2 | CH_zosmarina_104 | 3 | 5 | 0.0000508627 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |