Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.transcription factor (OFP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr6 1 CH_asa_147 5 13 0.0000000108812
Allium sativum chr8 1 CH_asa_238 6 71 0.000000750394
Brachypodium distachyon Bd2 1 CH_bdi_267 3 5 0.000282546
Secale cereale GWHASIY00000002 1 CH_sce_450 3 3 0.0000411811
Solanum lycopersicum SL4.0ch10 1 CH_sly_72 6 15 0.00000000000583191
Saccharum spontaneum Chr7C 1 CH_ssp_186 4 4 0.0000000443497
Allium sativum chr6 2 CH_asa_147 5 13 0.0000000108812
Allium sativum chr8 2 CH_asa_238 6 71 0.000000750394
Brachypodium distachyon Bd2 2 CH_bdi_267 3 5 0.000282546
Secale cereale GWHASIY00000002 2 CH_sce_450 3 3 0.0000411811
Solanum lycopersicum SL4.0ch10 2 CH_sly_72 6 15 0.00000000000583191
Saccharum spontaneum Chr7C 2 CH_ssp_186 4 4 0.0000000443497

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001