Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.transcription factor (OFP)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr6 | 1 | CH_asa_147 | 5 | 13 | 0.0000000108812 |
| Allium sativum | chr8 | 1 | CH_asa_238 | 6 | 71 | 0.000000750394 |
| Brachypodium distachyon | Bd2 | 1 | CH_bdi_267 | 3 | 5 | 0.000282546 |
| Secale cereale | GWHASIY00000002 | 1 | CH_sce_450 | 3 | 3 | 0.0000411811 |
| Solanum lycopersicum | SL4.0ch10 | 1 | CH_sly_72 | 6 | 15 | 0.00000000000583191 |
| Saccharum spontaneum | Chr7C | 1 | CH_ssp_186 | 4 | 4 | 0.0000000443497 |
| Allium sativum | chr6 | 2 | CH_asa_147 | 5 | 13 | 0.0000000108812 |
| Allium sativum | chr8 | 2 | CH_asa_238 | 6 | 71 | 0.000000750394 |
| Brachypodium distachyon | Bd2 | 2 | CH_bdi_267 | 3 | 5 | 0.000282546 |
| Secale cereale | GWHASIY00000002 | 2 | CH_sce_450 | 3 | 3 | 0.0000411811 |
| Solanum lycopersicum | SL4.0ch10 | 2 | CH_sly_72 | 6 | 15 | 0.00000000000583191 |
| Saccharum spontaneum | Chr7C | 2 | CH_ssp_186 | 4 | 4 | 0.0000000443497 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |